EnhancerDB
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  3. rs553391665[chr2:227618089]
Enhancers that have rs553391665[chr2:227618089]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 227617325 227640615 enh6179
Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs553391665[chr2:227618089]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 227618088 227618098 HOXD13 JASPAR yes 81491675
chr2 227618088 227618099 HOXA10 JASPAR yes 81491676
chr2 227618089 227618100 CDX2 JASPAR yes 81491677
Genes associated with rs553391665[chr2:227618089], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More