EnhancerDB
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  3. rs553396549[chr12:104611149]
Enhancers that have rs553396549[chr12:104611149]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 104605825 104618545 enh14941
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs553396549[chr12:104611149]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 104611141 104611157 E2F2 JASPAR yes 123361681
chr12 104611143 104611155 E2F1 JASPAR yes 123361682
chr12 104611146 104611158 YY1 JASPAR yes 123361683
chr12 104611149 104611155 YY1 JASPAR yes 123361684
Genes associated with rs553396549[chr12:104611149], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More