EnhancerDB
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  3. rs553400214[chr19:2085372]
Enhancers that have rs553400214[chr19:2085372]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2083344 2095175 enh4957
Skin (Keratinocyte) Liver (HepG2) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Uterus Blood (T-cell) Stomach
Transcript factors that have rs553400214[chr19:2085372]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2081583 2091561 ZNF274 GTRD no Blood (GM12878) 108357550
chr19 2081586 2091510 ZNF274 GTRD no Blood (GM12878) 108357551
chr19 2084589 2088520 ZNF274 GTRD no Blood (GM12878) 108357552
chr19 2084729 2091503 ZNF274 GTRD no Blood (GM12878) 108357553
chr19 2085366 2085387 IRF1 JASPAR yes 112047689
chr19 2085368 2085383 PRDM1 JASPAR yes 112047690
chr19 2085368 2085383 STAT2 JASPAR yes 112047691
chr19 2085369 2085390 IRF1 JASPAR yes 112047692
chr19 2085370 2085391 IRF1 JASPAR yes 112047693
chr19 2085371 2085386 FOXP1 JASPAR yes 112047694
chr19 2085371 2085392 IRF1 JASPAR yes 112047695
chr19 2085372 2085387 FOXP1 JASPAR yes 112047696
Genes associated with rs553400214[chr19:2085372], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More