EnhancerDB
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  3. rs553402552[chr17:25888370]
Enhancers that have rs553402552[chr17:25888370]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25884725 25904399 enh17065
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Blood (T-cell) Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Spleen Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs553402552[chr17:25888370]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25888352 25888373 ZNF263 JASPAR yes 53645785
chr17 25888356 25888377 ZNF263 JASPAR yes 53645786
chr17 25888359 25888380 ZNF263 JASPAR yes 53645787
chr17 25888360 25888370 MZF1 JASPAR yes 53645788
chr17 25888360 25888381 ZNF263 JASPAR yes 53645789
chr17 25888364 25888385 ZNF263 JASPAR yes 53645790
chr17 25888365 25888386 IRF1 JASPAR yes 53645791
chr17 25888368 25888372 YY1 TRANSFAC yes 53645792
Genes associated with rs553402552[chr17:25888370], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More