EnhancerDB
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  3. rs553410009[chr17:75123108]
Enhancers that have rs553410009[chr17:75123108]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 75089705 75123925 enh17395
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs553410009[chr17:75123108]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 75122684 75126226 TCF7L2 GTRD no Colon (HCT116) 21789834
chr17 75122684 75126226 TCF7L2 GTRD no Colon (HCT116) 108297383
chr17 75122684 75126226 TCF7L2 GTRD no Colon (HCT116) 108297384
chr17 75122973 75126463 TCF7L2 GTRD no Colon (HCT116) 21789835
chr17 75122973 75126463 TCF7L2 GTRD no Colon (HCT116) 108297385
chr17 75122973 75126463 TCF7L2 GTRD no Colon (HCT116) 108297386
chr17 75123106 75123112 TBP TRANSFAC yes 56044756
Genes associated with rs553410009[chr17:75123108], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More