EnhancerDB
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  3. rs553421696[chr17:78755881]
Enhancers that have rs553421696[chr17:78755881]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78745025 78774551 enh4637
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs553421696[chr17:78755881]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78755871 78755886 TFAP2A JASPAR yes 56278684
chr17 78755871 78755886 TFAP2C JASPAR yes 56278685
chr17 78755873 78755887 EBF1 JASPAR yes 56278686
chr17 78755873 78755888 TFAP2A JASPAR yes 56278687
chr17 78755874 78755885 EBF1 JASPAR yes 56278688
chr17 78755874 78755886 TFAP2B JASPAR yes 56278689
chr17 78755874 78755886 TFAP2C JASPAR yes 56278690
Genes associated with rs553421696[chr17:78755881], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More