EnhancerDB
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  3. rs553425186[chr15:58756006]
Enhancers that have rs553425186[chr15:58756006]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 58744595 58771635 enh16176
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs553425186[chr15:58756006]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 58755991 58756009 SRF JASPAR yes 23676780
chr15 58755996 58756006 HOXA13 JASPAR yes 23676785
Genes associated with rs553425186[chr15:58756006], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More