EnhancerDB
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  3. rs553434278[chr6:12334981]
Enhancers that have rs553434278[chr6:12334981]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 12317105 12339155 enh23034
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Blood (GM12878) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs553434278[chr6:12334981]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 12334976 12334982 LEF1 TRANSFAC yes 99962182
chr6 12334976 12334982 SOX10 JASPAR yes 99962183
chr6 12334981 12334986 GATA2 JASPAR yes 99962184
Genes associated with rs553434278[chr6:12334981], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More