EnhancerDB
  1. Home
  2. SNP
  3. rs553446579[chr1:17901325]
Enhancers that have rs553446579[chr1:17901325]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17883825 17906655 enh11558
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs553446579[chr1:17901325]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17901313 17901333 ESR1 JASPAR yes 27103739
chr1 17901323 17901331 SP1 TRANSFAC yes 27103740
chr1 17901323 17901333 SP1 JASPAR yes 27103741
chr1 17901324 17901330 SP1 TRANSFAC yes 27103742
chr1 17901324 17901334 SP1 JASPAR yes 27103743
chr1 17901325 17901332 SP1 TRANSFAC yes 27103744
Genes associated with rs553446579[chr1:17901325], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More