EnhancerDB
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  3. rs553457278[chr1:181119278]
Enhancers that have rs553457278[chr1:181119278]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 181115225 181124855 enh12431
Bone Marrow (K562) Prostate (RWPE1) Ovary Esophagus Astrocyte Blood (T-cell) Lung Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs553457278[chr1:181119278]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 181114294 181120429 ZNF143 GTRD no Epithelial (MCF-7) 21356460
chr1 181118846 181119436 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21356501
chr1 181118926 181119362 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21356507
chr1 181118940 181119340 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21356509
chr1 181119117 181119347 ZNF274 GTRD no Blood (GM12878) 21356510
chr1 181119175 181119352 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21356511
chr1 181119268 181119278 HOXA13 JASPAR yes 33559390
chr1 181119268 181119278 HOXB13 JASPAR yes 33559391
chr1 181119268 181119278 HOXD13 JASPAR yes 33559392
chr1 181119268 181119279 HOXA10 JASPAR yes 33559393
chr1 181119268 181119279 HOXD12 JASPAR yes 33559394
chr1 181119269 181119278 CDX1 JASPAR yes 33559395
chr1 181119269 181119280 CDX2 JASPAR yes 33559396
chr1 181119273 181119287 TLX1 JASPAR yes 33559397
chr1 181119275 181119286 E2F6 JASPAR yes 33559398
Genes associated with rs553457278[chr1:181119278], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More