EnhancerDB
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  3. rs553458460[chr1:179008878]
Enhancers that have rs553458460[chr1:179008878]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178994785 179010519 enh771
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Astrocyte Lung Blood (OCI-LY7) Blood (GM12878) Adrenal Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Blood (T-cell) Stomach
Transcript factors that have rs553458460[chr1:179008878]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 179008866 179008878 FOXC2 JASPAR yes 33463150
chr1 179008866 179008880 ONECUT2 JASPAR yes 33463151
chr1 179008866 179008880 ONECUT3 JASPAR yes 33463152
chr1 179008866 179008882 POU4F2 JASPAR yes 33463153
chr1 179008866 179008882 POU4F3 JASPAR yes 33463154
chr1 179008869 179008880 CDX2 JASPAR yes 33463156
chr1 179008873 179008885 FOXC2 JASPAR yes 33463157
chr1 179008875 179008879 YY1 TRANSFAC yes 33463158
chr1 179008878 179008893 FOXP1 JASPAR yes 33463159
Genes associated with rs553458460[chr1:179008878], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More