EnhancerDB
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  3. rs553486078[chr1:208346045]
Enhancers that have rs553486078[chr1:208346045]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 208343485 208368555 enh12612
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Brain (SK-N-SH) Esophagus Bone (Osteoblast) Blood (GM12878) Stomach Placenta Thyroid Uterus Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs553486078[chr1:208346045]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 208346040 208346052 YY1 JASPAR yes 34902889
chr1 208346041 208346046 GATA2 JASPAR yes 34902890
Genes associated with rs553486078[chr1:208346045], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More