EnhancerDB
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  3. rs553499669[chr4:124331220]
Enhancers that have rs553499669[chr4:124331220]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 124327710 124345595 enh21762
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Thyroid Uterus Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs553499669[chr4:124331220]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 124331218 124331227 VENTX JASPAR yes 92535903
chr4 124331218 124331228 GBX2 JASPAR yes 92535904
chr4 124331218 124331228 HOXB3 JASPAR yes 92535905
chr4 124331218 124331228 MNX1 JASPAR yes 92535906
chr4 124331219 124331227 BARX1 JASPAR yes 92535907
chr4 124331219 124331227 BSX JASPAR yes 92535908
chr4 124331219 124331227 ISL2 JASPAR yes 92535909
chr4 124331219 124331227 LMX1B JASPAR yes 92535910
chr4 124331219 124331227 MSX1 JASPAR yes 92535911
chr4 124331219 124331227 MSX2 JASPAR yes 92535912
Genes associated with rs553499669[chr4:124331220], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More