EnhancerDB
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  3. rs553521169[chr16:87825407]
Enhancers that have rs553521169[chr16:87825407]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87806255 87830395 enh4179
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs553521169[chr16:87825407]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87819648 87864046 ZBTB33 GTRD no Lung (A549) 108220354
chr16 87819648 87864046 ZBTB33 GTRD no Lung (A549) 108220355
chr16 87819648 87864046 ZBTB33 GTRD no Lung (A549) 108220356
chr16 87819648 87864046 ZBTB33 GTRD no Lung (A549) 108220357
chr16 87819648 87864046 ZBTB33 GTRD no Lung (A549) 108220358
chr16 87819648 87864046 ZBTB33 GTRD no Lung (A549) 108220359
chr16 87819648 87864046 ZBTB33 GTRD no Lung (A549) 108220360
chr16 87821323 87862287 ZBTB33 GTRD no Lung (A549) 108220361
chr16 87821323 87862287 ZBTB33 GTRD no Lung (A549) 108220362
chr16 87821323 87862287 ZBTB33 GTRD no Lung (A549) 108220363
chr16 87821323 87862287 ZBTB33 GTRD no Lung (A549) 108220364
chr16 87821323 87862287 ZBTB33 GTRD no Lung (A549) 108220365
chr16 87821323 87862287 ZBTB33 GTRD no Lung (A549) 108220366
chr16 87821323 87862287 ZBTB33 GTRD no Lung (A549) 108220367
chr16 87821465 87826179 ZBTB33 GTRD no Lung (A549) 108220368
chr16 87821465 87826179 ZBTB33 GTRD no Lung (A549) 108220369
chr16 87821800 87826091 ZBTB33 GTRD no Lung (A549) 108220370
chr16 87821800 87826091 ZBTB33 GTRD no Lung (A549) 108220371
chr16 87822131 87826082 ZBTB33 GTRD no Lung (A549) 108220372
chr16 87822131 87826082 ZBTB33 GTRD no Lung (A549) 108220373
chr16 87822228 87826156 ZBTB33 GTRD no Lung (A549) 108220374
chr16 87822228 87826156 ZBTB33 GTRD no Lung (A549) 108220375
chr16 87822425 87826013 ZBTB33 GTRD no Lung (A549) 108220379
chr16 87822425 87826013 ZBTB33 GTRD no Lung (A549) 108220380
chr16 87822782 87833619 ZBTB33 GTRD no Lung (A549) 108220385
chr16 87822782 87833619 ZBTB33 GTRD no Lung (A549) 108220386
chr16 87822813 87826189 ZBTB33 GTRD no Lung (A549) 108220391
chr16 87822813 87826189 ZBTB33 GTRD no Lung (A549) 108220392
chr16 87823164 87826097 ZNF143 GTRD no Epithelial (MCF-7) 21734541
chr16 87823164 87826097 ZNF143 GTRD no Epithelial (MCF-7) 108220420
chr16 87823164 87826097 ZNF143 GTRD no Epithelial (MCF-7) 108220421
chr16 87823166 87826045 ZBTB33 GTRD no Lung (A549) 108220422
chr16 87823166 87826045 ZBTB33 GTRD no Lung (A549) 108220423
chr16 87823185 87825821 TCF7L2 GTRD no Colon (HCT116) 21734543
chr16 87823185 87825821 TCF7L2 GTRD no Colon (HCT116) 108220426
chr16 87823185 87825821 TCF7L2 GTRD no Colon (HCT116) 108220427
chr16 87823198 87826188 ZBTB33 GTRD no Lung (A549) 108220433
chr16 87823198 87826188 ZBTB33 GTRD no Lung (A549) 108220434
chr16 87823245 87826138 TCF7L2 GTRD no Colon (HCT116) 21734557
chr16 87823245 87826138 TCF7L2 GTRD no Colon (HCT116) 108220449
chr16 87823245 87826138 TCF7L2 GTRD no Colon (HCT116) 108220450
chr16 87823323 87825873 TCF7L2 GTRD no Colon (HCT116) 21734564
chr16 87823323 87825873 TCF7L2 GTRD no Colon (HCT116) 108220464
chr16 87823323 87825873 TCF7L2 GTRD no Colon (HCT116) 108220465
chr16 87823544 87826170 ZBTB33 GTRD no Lung (A549) 108220486
chr16 87823770 87825999 ZBTB33 GTRD no Lung (A549) 108220532
chr16 87823814 87825992 ZBTB33 GTRD no Lung (A549) 108220534
chr16 87823868 87825742 TCF7L2 GTRD no Colon (HCT116) 21734606
chr16 87824714 87825718 TCF7L2 GTRD no Colon (HCT116) 21734618
chr16 87824906 87825612 TCF7L2 GTRD no Colon (HCT116) 21734619
chr16 87824975 87825512 TCF7L2 GTRD no Colon (HCT116) 21734620
chr16 87825022 87825522 ZNF274 GTRD no Bone Marrow (K562) 21734621
chr16 87825084 87825851 TCF7L2 GTRD no Colon (HCT116) 21734622
chr16 87825159 87826146 ZNF274 GTRD no Liver (HepG2) 21734623
chr16 87825234 87825514 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21734624
chr16 87825400 87825418 RARA JASPAR yes 12240123
chr16 87825407 87825425 ESR1 JASPAR yes 12240124
Genes associated with rs553521169[chr16:87825407], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More