EnhancerDB
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  3. rs553542026[chr1:229835789]
Enhancers that have rs553542026[chr1:229835789]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229824305 229836055 enh981
Brain (SK-N-SH) Blood (T-cell) Astrocyte Blood (OCI-LY7) Stomach Muscle (A673) Thyroid Uterus Blood (Karpas-422) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs553542026[chr1:229835789]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229835788 229835803 FOXA1 JASPAR yes 35997952
chr1 229835789 229835800 FOXB1 JASPAR yes 35997953
chr1 229835789 229835800 FOXC1 JASPAR yes 35997954
chr1 229835789 229835801 FOXC2 JASPAR yes 35997955
Genes associated with rs553542026[chr1:229835789], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More