EnhancerDB
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  3. rs553552436[chr12:122231029]
Enhancers that have rs553552436[chr12:122231029]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122219767 122240055 enh2650
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs553552436[chr12:122231029]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122229445 122231065 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21579500
chr12 122229445 122231065 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108065673
chr12 122229445 122242257 POLR2A UCSC Txn Factor no Conserved 108065674
chr12 122231017 122231029 HINFP JASPAR yes 124247257
chr12 122231024 122231033 TFAP2A JASPAR yes 124247258
Genes associated with rs553552436[chr12:122231029], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More