EnhancerDB
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  3. rs553559104[chr6:30726380]
Enhancers that have rs553559104[chr6:30726380]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30713465 30740215 enh23148
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs553559104[chr6:30726380]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30726375 30726389 POU4F1 JASPAR yes 101045265
chr6 30726375 30726391 POU4F2 JASPAR yes 101045266
chr6 30726375 30726391 POU4F3 JASPAR yes 101045267
chr6 30726376 30726388 MEF2D JASPAR yes 101045268
chr6 30726378 30726382 YY1 TRANSFAC yes 101045269
chr6 30726380 30726390 HOXA13 JASPAR yes 101045270
chr6 30726380 30726390 HOXB13 JASPAR yes 101045271
chr6 30726380 30726390 HOXD13 JASPAR yes 101045272
Genes associated with rs553559104[chr6:30726380], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More