EnhancerDB
  1. Home
  2. SNP
  3. rs553560981[chr12:46937790]
Enhancers that have rs553560981[chr12:46937790]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46935165 46958895 enh14680
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs553560981[chr12:46937790]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46937785 46937796 HOXC13 JASPAR yes 120635596
chr12 46937789 46937799 ESX1 JASPAR yes 120635597
chr12 46937789 46937799 GBX2 JASPAR yes 120635598
chr12 46937789 46937799 HESX1 JASPAR yes 120635599
chr12 46937789 46937799 LBX2 JASPAR yes 120635600
chr12 46937789 46937799 MIXL1 JASPAR yes 120635601
chr12 46937789 46937799 RAX JASPAR yes 120635602
chr12 46937790 46937798 ISX JASPAR yes 120635603
chr12 46937790 46937798 LHX9 JASPAR yes 120635604
chr12 46937790 46937798 LMX1B JASPAR yes 120635605
chr12 46937790 46937798 PRRX1 JASPAR yes 120635606
chr12 46937790 46937798 RAX2 JASPAR yes 120635607
chr12 46937790 46937798 SHOX JASPAR yes 120635608
chr12 46937790 46937798 UNCX JASPAR yes 120635609
Genes associated with rs553560981[chr12:46937790], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More