EnhancerDB
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  3. rs553620078[chr1:225875710]
Enhancers that have rs553620078[chr1:225875710]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225875685 225891098 enh12722
Liver Astrocyte Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs553620078[chr1:225875710]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225874763 225876288 ZNF143 GTRD no Epithelial (MCF-7) 21385190
chr1 225874869 225876144 AR GTRD no Prostate (PC-3) 21385191
chr1 225874911 225876268 ZNF143 GTRD no Epithelial (MCF-7) 21385192
chr1 225874967 225876189 ZNF143 GTRD no Epithelial (MCF-7) 21385193
chr1 225874973 225876054 ZNF143 GTRD no Epithelial (MCF-7) 21385194
chr1 225874977 225876375 ZNF143 GTRD no Epithelial (MCF-7) 21385195
chr1 225874998 225876060 ZNF143 GTRD no Epithelial (MCF-7) 21385196
chr1 225875005 225876044 ZNF143 GTRD no Epithelial (MCF-7) 21385197
chr1 225875011 225875995 ZNF143 GTRD no Epithelial (MCF-7) 21385198
chr1 225875020 225876142 ZNF143 GTRD no Epithelial (MCF-7) 21385199
chr1 225875043 225876326 ZNF143 GTRD no Epithelial (MCF-7) 21385200
chr1 225875064 225876004 ZNF143 GTRD no Epithelial (MCF-7) 21385201
chr1 225875078 225876044 ZNF143 GTRD no Epithelial (MCF-7) 21385202
chr1 225875084 225876065 ZNF143 GTRD no Epithelial (MCF-7) 21385203
chr1 225875089 225876149 ZNF143 GTRD no Epithelial (MCF-7) 21385204
chr1 225875089 225876206 ZNF143 GTRD no Epithelial (MCF-7) 21385205
chr1 225875103 225876065 ZNF143 GTRD no Epithelial (MCF-7) 21385206
chr1 225875128 225876183 ZNF143 GTRD no Epithelial (MCF-7) 21385207
chr1 225875132 225876115 ZNF143 GTRD no Epithelial (MCF-7) 21385208
chr1 225875156 225875896 ZNF143 GTRD no Epithelial (MCF-7) 21385209
chr1 225875215 225875971 ZNF143 GTRD no Epithelial (MCF-7) 21385210
chr1 225875245 225875952 ERG GTRD no Prostate (RWPE1) 21385211
chr1 225875274 225876003 ZNF143 GTRD no Epithelial (MCF-7) 21385212
chr1 225875280 225875982 ZNF143 GTRD no Epithelial (MCF-7) 21385213
chr1 225875289 225876035 ZNF143 GTRD no Epithelial (MCF-7) 21385214
chr1 225875290 225876070 ZNF143 GTRD no Epithelial (MCF-7) 21385215
chr1 225875291 225875981 ZNF143 GTRD no Epithelial (MCF-7) 21385216
chr1 225875300 225875931 ZNF143 GTRD no Epithelial (MCF-7) 21385217
chr1 225875303 225876012 ZNF143 GTRD no Epithelial (MCF-7) 21385218
chr1 225875306 225875976 ZNF143 GTRD no Epithelial (MCF-7) 21385219
chr1 225875311 225876048 ZNF143 GTRD no Epithelial (MCF-7) 21385220
chr1 225875313 225875946 ZNF143 GTRD no Epithelial (MCF-7) 21385221
chr1 225875318 225875999 ZNF143 GTRD no Epithelial (MCF-7) 21385222
chr1 225875321 225875758 ZNF143 GTRD no Epithelial (MCF-7) 21385223
chr1 225875332 225875859 ZNF143 GTRD no Epithelial (MCF-7) 21385224
chr1 225875347 225875996 ZNF143 GTRD no Epithelial (MCF-7) 21385225
chr1 225875374 225875942 ZNF143 GTRD no Epithelial (MCF-7) 21385226
chr1 225875409 225875757 ZNF143 GTRD no Epithelial (MCF-7) 21385227
chr1 225875427 225875996 ZNF143 GTRD no Epithelial (MCF-7) 21385228
chr1 225875428 225875919 ZNF143 GTRD no Epithelial (MCF-7) 21385229
chr1 225875450 225875875 ZNF143 GTRD no Epithelial (MCF-7) 21385230
chr1 225875465 225875739 ZNF143 GTRD no Epithelial (MCF-7) 21385231
chr1 225875465 225875862 ZNF143 GTRD no Epithelial (MCF-7) 21385232
chr1 225875478 225875778 ZNF143 GTRD no Epithelial (MCF-7) 21385233
chr1 225875498 225875873 ZNF143 GTRD no Epithelial (MCF-7) 21385234
chr1 225875500 225876034 ZNF143 GTRD no Epithelial (MCF-7) 21385235
chr1 225875515 225875961 ZNF143 GTRD no Epithelial (MCF-7) 21385236
chr1 225875522 225875936 ZNF143 GTRD no Epithelial (MCF-7) 21385237
chr1 225875527 225875879 ZNF143 GTRD no Epithelial (MCF-7) 21385238
chr1 225875561 225875903 ZNF143 GTRD no Epithelial (MCF-7) 21385239
Genes associated with rs553620078[chr1:225875710], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More