EnhancerDB
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  3. rs553620160[chr2:40475792]
Enhancers that have rs553620160[chr2:40475792]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 40465100 40480555 enh33258
Large Intestine Astrocyte Bone (Osteoblast) Lung Stomach Uterus Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs553620160[chr2:40475792]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 40475783 40475794 CDX2 JASPAR yes 73255648
chr2 40475784 40475794 MNX1 JASPAR yes 73255649
chr2 40475784 40475795 HOXA10 JASPAR yes 73255650
chr2 40475784 40475795 HOXC12 JASPAR yes 73255651
chr2 40475785 40475794 CDX1 JASPAR yes 73255652
chr2 40475785 40475795 HOXA13 JASPAR yes 73255653
chr2 40475785 40475795 HOXB13 JASPAR yes 73255654
chr2 40475785 40475795 HOXC10 JASPAR yes 73255655
chr2 40475785 40475795 HOXD13 JASPAR yes 73255656
chr2 40475785 40475801 POU4F2 JASPAR yes 73255657
chr2 40475790 40475800 OLIG3 JASPAR yes 73255658
Genes associated with rs553620160[chr2:40475792], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More