EnhancerDB
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  3. rs553624439[chr2:238528516]
Enhancers that have rs553624439[chr2:238528516]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238519874 238529599 enh19399
Liver (HepG2) Brain (SK-N-SH) Large Intestine Lung (PC-9) Astrocyte Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Thyroid Uterus Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas Spleen Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs553624439[chr2:238528516]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238528503 238528516 NFKB1 JASPAR yes 82125345
chr2 238528503 238528516 NFKB2 JASPAR yes 82125346
chr2 238528505 238528516 NFKB1 JASPAR yes 82125350
chr2 238528506 238528516 RELA JASPAR yes 82125351
chr2 238528506 238528516 REL JASPAR yes 82125352
Genes associated with rs553624439[chr2:238528516], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More