EnhancerDB
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Enhancers that have rs553628039[chr5:167126514]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 167123051 167130675 enh22776
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9)
chr5 167126470 167126930 vista49997
VISTA
Transcript factors that have rs553628039[chr5:167126514]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 167126407 167126870 EP300 UCSC Txn Factor no Conserved 108537310
chr5 167126410 167126825 FOSL2 UCSC Txn Factor no Conserved 108537311
chr5 167126425 167126827 JUND UCSC Txn Factor no Conserved 108537312
chr5 167126426 167126797 STAT3 UCSC Txn Factor no Conserved 108537313
chr5 167126439 167126830 TCF12 UCSC Txn Factor no Conserved 108537314
chr5 167126453 167126774 CEBPB UCSC Txn Factor no Conserved 108537315
chr5 167126454 167126786 FOS UCSC Txn Factor no Conserved 108537316
chr5 167126471 167126794 NR3C1 UCSC Txn Factor no Conserved 108537317
chr5 167126510 167126521 FOS JASPAR yes 67529251
chr5 167126510 167126521 JUND JASPAR yes 67529252
chr5 167126510 167126521 NFE2 JASPAR yes 67529253
chr5 167126510 167126521 FOS JASPAR yes 70755040
chr5 167126510 167126521 JUND JASPAR yes 70755041
chr5 167126510 167126521 NFE2 JASPAR yes 70755042
chr5 167126511 167126522 FOSL2 JASPAR yes 67529254
chr5 167126511 167126522 JUNB JASPAR yes 67529255
chr5 167126511 167126522 FOSL2 JASPAR yes 70755043
chr5 167126511 167126522 JUNB JASPAR yes 70755044
chr5 167126511 167126525 JUN JASPAR yes 67529256
chr5 167126511 167126525 JUN JASPAR yes 70755045
chr5 167126512 167126518 JUN TRANSFAC yes 67529257
chr5 167126512 167126518 JUN TRANSFAC yes 70755046
Genes associated with rs553628039[chr5:167126514], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More