EnhancerDB
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  3. rs553628052[chr1:178996617]
Enhancers that have rs553628052[chr1:178996617]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178994785 179010519 enh771
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Astrocyte Lung Blood (OCI-LY7) Blood (GM12878) Adrenal Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Blood (T-cell) Stomach
Transcript factors that have rs553628052[chr1:178996617]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178996608 178996622 ONECUT1 JASPAR yes 33461401
chr1 178996608 178996622 ONECUT2 JASPAR yes 33461402
chr1 178996608 178996622 ONECUT3 JASPAR yes 33461403
Genes associated with rs553628052[chr1:178996617], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More