EnhancerDB
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  3. rs553640406[chr2:28859059]
Enhancers that have rs553640406[chr2:28859059]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28854725 28893200 enh18394
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs553640406[chr2:28859059]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28859057 28859071 RXRB JASPAR yes 72662108
chr2 28859057 28859071 RXRG JASPAR yes 72662109
Genes associated with rs553640406[chr2:28859059], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More