EnhancerDB
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  3. rs553641504[chr12:104605843]
Enhancers that have rs553641504[chr12:104605843]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 104605825 104618545 enh14941
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs553641504[chr12:104605843]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 104602481 104606070 TCF7L2 GTRD no Colon (HCT116) 21569185
chr12 104605831 104605845 PLAG1 JASPAR yes 123360915
chr12 104605838 104605843 SP1 TRANSFAC yes 123360916
chr12 104605839 104605844 SP1 TRANSFAC yes 123360917
chr12 104605842 104605855 NFKB1 JASPAR yes 123360918
Genes associated with rs553641504[chr12:104605843], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More