EnhancerDB
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  3. rs553644565[chr1:41277080]
Enhancers that have rs553644565[chr1:41277080]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41258745 41277518 enh278
Bone Marrow (K562) Large Intestine Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs553644565[chr1:41277080]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41277072 41277084 GLI2 JASPAR yes 28346031
chr1 41277078 41277082 H4TF2 TRANSFAC yes 28346032
chr1 41277079 41277098 RFX2 JASPAR yes 28346033
chr1 41277080 41277086 MZF1 JASPAR yes 28346034
Genes associated with rs553644565[chr1:41277080], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More