EnhancerDB
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  3. rs553646221[chr1:26013334]
Enhancers that have rs553646221[chr1:26013334]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 26013045 26035965 enh11635
Astrocyte Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs553646221[chr1:26013334]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 26013323 26013342 RFX2 JASPAR yes 27597757
chr1 26013329 26013335 ETS1 JASPAR yes 27597758
Genes associated with rs553646221[chr1:26013334], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More