EnhancerDB
  1. Home
  2. SNP
  3. rs553649288[chr10:98780904]
Enhancers that have rs553649288[chr10:98780904]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 98778685 98792959 enh1451
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Ovary Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Stomach Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs553649288[chr10:98780904]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 98780895 98780909 GLIS2 JASPAR yes 129374005
chr10 98780895 98780909 GLIS3 JASPAR yes 129374006
chr10 98780895 98780909 ZIC1 JASPAR yes 129374007
chr10 98780899 98780905 SP1 TRANSFAC yes 129374008
chr10 98780899 98780909 SP1 JASPAR yes 129374009
chr10 98780901 98780906 SP1 TRANSFAC yes 129374010
Genes associated with rs553649288[chr10:98780904], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More