EnhancerDB
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  3. rs553659669[chr5:148835292]
Enhancers that have rs553659669[chr5:148835292]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 148806414 148838675 enh22700
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs553659669[chr5:148835292]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 148835284 148835299 TFAP2A JASPAR yes 66816629
chr5 148835284 148835299 TFAP2C JASPAR yes 66816630
chr5 148835286 148835301 TFAP2A JASPAR yes 66816631
chr5 148835286 148835301 TFAP2C JASPAR yes 66816632
chr5 148835287 148835298 TFAP2A JASPAR yes 66816633
chr5 148835287 148835298 TFAP2B JASPAR yes 66816634
chr5 148835287 148835298 TFAP2C JASPAR yes 66816635
Genes associated with rs553659669[chr5:148835292], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More