EnhancerDB
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  3. rs553659907[chr17:65515512]
Enhancers that have rs553659907[chr17:65515512]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65492714 65528744 enh17323
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Astrocyte Bone (Osteoblast) Lung (A549) Blood (GM12878) Stomach Placenta Colon (HCT116) Uterus Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs553659907[chr17:65515512]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65515459 65517175 TCF7L2 GTRD no Colon (HCT116) 21782347
chr17 65515459 65517175 TCF7L2 GTRD no Colon (HCT116) 108286041
chr17 65515497 65515512 AR JASPAR yes 55515566
chr17 65515508 65515526 RARA JASPAR yes 55515567
Genes associated with rs553659907[chr17:65515512], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More