EnhancerDB
  1. Home
  2. SNP
  3. rs553661296[chr16:89380338]
Enhancers that have rs553661296[chr16:89380338]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89371847 89409975 enh16905
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs553661296[chr16:89380338]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89380331 89380341 NFATC3 JASPAR yes 12329895
chr16 89380331 89380346 FOXP1 JASPAR yes 12329896
chr16 89380333 89380340 NFATC2 JASPAR yes 12329897
chr16 89380334 89380348 STAT1 JASPAR yes 12329898
chr16 89380335 89380350 FOXP1 JASPAR yes 12329899
chr16 89380336 89380347 FOXA1 JASPAR yes 12329900
chr16 89380336 89380351 FOXA1 JASPAR yes 12329901
chr16 89380337 89380349 FOXC2 JASPAR yes 12329902
chr16 89380337 89380357 RREB1 JASPAR yes 12329903
chr16 89380338 89380350 FOXI1 JASPAR yes 12329904
chr16 89380338 89380358 RREB1 JASPAR yes 12329905
Genes associated with rs553661296[chr16:89380338], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More