EnhancerDB
  1. Home
  2. SNP
  3. rs553672300[chr4:86409003]
Enhancers that have rs553672300[chr4:86409003]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 86405985 86423917 enh8051
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Liver Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Uterus Epithelial (MCF-7)
Transcript factors that have rs553672300[chr4:86409003]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 86408988 86409003 FOXA1 JASPAR yes 90999364
chr4 86408999 86409013 ONECUT3 JASPAR yes 90999373
chr4 86409001 86409005 YY1 TRANSFAC yes 90999374
Genes associated with rs553672300[chr4:86409003], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More