EnhancerDB
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  3. rs553679358[chr1:19323885]
Enhancers that have rs553679358[chr1:19323885]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19322701 19342495 enh11568
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs553679358[chr1:19323885]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19323854 19324846 TCF7L2 GTRD no Colon (HCT116) 107802294
chr1 19323874 19323887 ELF1 JASPAR yes 27168677
chr1 19323875 19323887 EHF JASPAR yes 27168678
chr1 19323875 19323887 ELF1 JASPAR yes 27168679
chr1 19323875 19323888 ELF3 JASPAR yes 27168680
chr1 19323876 19323887 ELF5 JASPAR yes 27168681
Genes associated with rs553679358[chr1:19323885], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More