EnhancerDB
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Enhancers that have rs553754626[chr17:55456843]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55440094 55459475 enh17241
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 55456674 55456859 vista25227
VISTA
Transcript factors that have rs553754626[chr17:55456843]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55448417 55457368 ZBTB33 GTRD no Lung (A549) 108273940
chr17 55448498 55457254 ZBTB33 GTRD no Lung (A549) 108273941
chr17 55454241 55457413 TEF1 GTRD no Bone (Osteoblast) 108273942
chr17 55454357 55457240 ZBTB33 GTRD no Lung (A549) 108273943
chr17 55456442 55457181 ZNF274 GTRD no Blood (GM12878) 21773489
chr17 55456442 55457181 ZNF274 GTRD no Blood (GM12878) 108273949
chr17 55456566 55457116 ZNF274 GTRD no Blood (GM12878) 21773490
chr17 55456566 55457116 ZNF274 GTRD no Blood (GM12878) 108273950
chr17 55456582 55457466 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21773491
chr17 55456582 55457466 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108273951
chr17 55456606 55457074 ZNF274 GTRD no Blood (GM12878) 21773492
chr17 55456606 55457074 ZNF274 GTRD no Blood (GM12878) 108273952
chr17 55456676 55457102 ZNF143 GTRD no Epithelial (MCF-7) 21773493
chr17 55456676 55457102 ZNF143 GTRD no Epithelial (MCF-7) 108273953
chr17 55456694 55457050 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21773494
chr17 55456694 55457050 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108273954
chr17 55456697 55457062 EP300 UCSC Txn Factor no Conserved 108273955
chr17 55456701 55456984 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21773495
chr17 55456701 55456984 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108273956
chr17 55456717 55456997 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21773496
chr17 55456717 55456997 MAFF UCSC Txn Factor no Conserved 108273957
chr17 55456717 55456997 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108273958
chr17 55456727 55457277 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21773497
chr17 55456727 55457277 GATA2 UCSC Txn Factor no Conserved 108273959
chr17 55456727 55457277 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108273960
chr17 55456746 55457026 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21773498
chr17 55456746 55457026 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108273961
chr17 55456759 55457083 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108273962
chr17 55456759 55457175 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21773499
chr17 55456759 55457175 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108273963
chr17 55456765 55457221 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21773500
chr17 55456765 55457221 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108273964
chr17 55456778 55457138 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21773501
chr17 55456778 55457138 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108273965
chr17 55456778 55457354 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21773502
chr17 55456778 55457354 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108273966
chr17 55456802 55457066 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21773503
chr17 55456802 55457066 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108273967
chr17 55456806 55457302 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21773504
chr17 55456806 55457302 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108273968
chr17 55456818 55457154 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21773505
chr17 55456818 55457154 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108273969
chr17 55456819 55457175 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21773506
chr17 55456819 55457175 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108273970
chr17 55456822 55457212 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21773507
chr17 55456822 55457212 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108273971
chr17 55456824 55456845 IRF1 JASPAR yes 21259372
chr17 55456824 55456845 IRF1 JASPAR yes 54948736
chr17 55456825 55456846 IRF1 JASPAR yes 21259373
chr17 55456825 55456846 IRF1 JASPAR yes 54948737
chr17 55456825 55457181 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21773508
chr17 55456825 55457181 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108273972
chr17 55456827 55457177 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21773509
chr17 55456827 55457177 STAT5A UCSC Txn Factor no Conserved 108273973
chr17 55456827 55457177 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108273974
chr17 55456829 55456850 IRF1 JASPAR yes 21259374
chr17 55456829 55456850 IRF1 JASPAR yes 54948738
chr17 55456830 55456845 LEF1 JASPAR yes 21259375
chr17 55456830 55456845 LEF1 JASPAR yes 54948739
chr17 55456830 55456851 IRF1 JASPAR yes 21259376
chr17 55456830 55456851 IRF1 JASPAR yes 54948740
chr17 55456831 55456845 TCF7L2 JASPAR yes 21259377
chr17 55456831 55456845 TCF7L2 JASPAR yes 54948741
chr17 55456833 55456854 IRF1 JASPAR yes 21259378
chr17 55456833 55456854 IRF1 JASPAR yes 54948742
chr17 55456834 55457149 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21773510
chr17 55456834 55457149 TEAD4 UCSC Txn Factor no Conserved 108273975
chr17 55456834 55457149 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108273976
chr17 55456836 55456850 SPI1 JASPAR yes 21259379
chr17 55456836 55456850 SPI1 JASPAR yes 54948743
chr17 55456836 55456857 IRF1 JASPAR yes 21259380
chr17 55456836 55456857 IRF1 JASPAR yes 54948744
chr17 55456836 55457276 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21773511
chr17 55456836 55457276 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108273977
chr17 55456839 55456854 FOXP1 JASPAR yes 21259381
chr17 55456839 55456854 FOXP1 JASPAR yes 54948745
chr17 55456839 55457180 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21773512
chr17 55456839 55457180 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108273978
chr17 55456839 55457239 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21773513
chr17 55456839 55457239 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108273979
chr17 55456840 55456861 IRF1 JASPAR yes 21259382
chr17 55456840 55456861 IRF1 JASPAR yes 54948746
chr17 55456841 55456856 FOXP1 JASPAR yes 21259383
chr17 55456841 55456856 FOXP1 JASPAR yes 54948747
chr17 55456841 55456862 IRF1 JASPAR yes 21259384
chr17 55456841 55456862 IRF1 JASPAR yes 54948748
chr17 55456842 55456857 FOXP1 JASPAR yes 21259385
chr17 55456842 55456857 FOXP1 JASPAR yes 54948749
chr17 55456843 55456858 FOXP1 JASPAR yes 21259386
chr17 55456843 55456858 FOXP1 JASPAR yes 54948750
Genes associated with rs553754626[chr17:55456843], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More