EnhancerDB
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  3. rs553760972[chr1:178626103]
Enhancers that have rs553760972[chr1:178626103]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178606845 178636895 enh759
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Ovary Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs553760972[chr1:178626103]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178625563 178626444 ZNF274 GTRD no Liver (HepG2) 21352845
chr1 178625569 178626347 ZNF274 GTRD no Liver (HepG2) 21352846
chr1 178625614 178626342 ZNF274 GTRD no Liver (HepG2) 21352847
chr1 178625641 178626256 ZNF274 GTRD no Liver (HepG2) 21352848
chr1 178625664 178626386 ZNF274 GTRD no Liver (HepG2) 21352849
chr1 178625685 178626202 ZNF274 GTRD no Liver (HepG2) 21352850
chr1 178625696 178626155 ZNF274 GTRD no Liver (HepG2) 21352851
chr1 178625721 178626192 ZNF274 GTRD no Liver (HepG2) 21352852
chr1 178625727 178626141 ZNF274 GTRD no Liver (HepG2) 21352853
chr1 178625794 178626155 ZNF274 GTRD no Liver (HepG2) 21352854
chr1 178625821 178626256 ZNF274 GTRD no Liver (HepG2) 21352855
chr1 178626098 178626119 IRF1 JASPAR yes 33434524
chr1 178626100 178626121 IRF1 JASPAR yes 33434525
chr1 178626101 178626105 YY1 TRANSFAC yes 33434526
chr1 178626101 178626116 FOXP1 JASPAR yes 33434527
chr1 178626102 178626117 FOXP1 JASPAR yes 33434528
chr1 178626103 178626118 FOXP1 JASPAR yes 33434529
Genes associated with rs553760972[chr1:178626103], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More