EnhancerDB
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  3. rs553772779[chr3:57969456]
Enhancers that have rs553772779[chr3:57969456]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 57952365 57980395 enh7247
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr3 57969350 57969849 vista41103
VISTA
Transcript factors that have rs553772779[chr3:57969456]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 57969416 57969937 EP300 UCSC Txn Factor no Conserved 108529366
chr3 57969451 57969466 HNF4A JASPAR yes 2660750
chr3 57969451 57969466 HNF4A JASPAR yes 70990420
Genes associated with rs553772779[chr3:57969456], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More