EnhancerDB
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  3. rs553788670[chr17:75104103]
Enhancers that have rs553788670[chr17:75104103]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 75089705 75123925 enh17395
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs553788670[chr17:75104103]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 75103290 75104435 ZBTB33 GTRD no Lung (A549) 108296920
chr17 75103357 75104150 ZNF143 GTRD no Epithelial (MCF-7) 108296921
chr17 75103358 75104603 ZBTB33 GTRD no Lung (A549) 108296922
chr17 75103369 75106665 ZBTB33 GTRD no Lung (A549) 108296923
chr17 75103369 75106665 ZBTB33 GTRD no Lung (A549) 108296924
chr17 75103434 75104118 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21789543
chr17 75103434 75104118 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108296928
chr17 75103480 75104146 ZNF274 GTRD no Blood (GM12878) 21789546
chr17 75103480 75104146 ZNF274 GTRD no Blood (GM12878) 108296931
chr17 75103868 75104549 ZNF143 GTRD no Epithelial (MCF-7) 108296960
chr17 75103905 75104489 TCF7L2 GTRD no Colon (HCT116) 21789572
chr17 75103905 75104489 TCF7L2 GTRD no Colon (HCT116) 108296961
chr17 75103924 75106624 ZBTB33 GTRD no Lung (A549) 108296962
chr17 75104096 75104109 ZBTB18 JASPAR yes 56042047
chr17 75104097 75104109 PKNOX1 JASPAR yes 56042048
chr17 75104097 75104109 TGIF1 JASPAR yes 56042049
chr17 75104098 75104107 SNAI2 JASPAR yes 56042050
chr17 75104098 75104108 FIGLA JASPAR yes 56042051
chr17 75104098 75104108 ID4 JASPAR yes 56042052
chr17 75104098 75104108 TCF3 JASPAR yes 56042053
chr17 75104098 75104108 TCF4 JASPAR yes 56042054
chr17 75104100 75104109 ZEB1 JASPAR yes 56042055
chr17 75104100 75104110 TBX21 JASPAR yes 56042056
chr17 75104101 75104109 MGA JASPAR yes 56042057
chr17 75104101 75104109 TBX15 JASPAR yes 56042058
chr17 75104101 75104109 TBX1 JASPAR yes 56042059
chr17 75104101 75104109 TBX4 JASPAR yes 56042060
chr17 75104101 75104109 TBX5 JASPAR yes 56042061
chr17 75104101 75104111 TBR1 JASPAR yes 56042062
chr17 75104101 75104114 SMAD2 JASPAR yes 56042063
Genes associated with rs553788670[chr17:75104103], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More