EnhancerDB
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  3. rs553795079[chr17:76351163]
Enhancers that have rs553795079[chr17:76351163]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76316725 76355075 enh17407
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs553795079[chr17:76351163]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76350978 76351720 TCF7L2 GTRD no Colon (HCT116) 21793756
chr17 76351072 76351744 TCF7L2 GTRD no Colon (HCT116) 21793757
chr17 76351089 76351703 TCF7L2 GTRD no Colon (HCT116) 21793758
chr17 76351119 76352549 ZNF274 GTRD no Liver (HepG2) 21793759
chr17 76351147 76351166 PAX5 JASPAR yes 56151918
chr17 76351149 76351163 ZIC1 JASPAR yes 56151919
chr17 76351149 76351164 ZIC3 JASPAR yes 56151920
chr17 76351149 76351164 ZIC4 JASPAR yes 56151921
chr17 76351153 76351167 PLAG1 JASPAR yes 56151922
chr17 76351158 76351176 ESR1 JASPAR yes 56151923
Genes associated with rs553795079[chr17:76351163], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More