EnhancerDB
  1. Home
  2. SNP
  3. rs553804210[chr1:22349218]
Enhancers that have rs553804210[chr1:22349218]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 22343446 22360375 enh116
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Pancreas (Panc1) Blood (Karpas-422) Lung (PC-9) Spleen Uterus Thymus Stomach
Transcript factors that have rs553804210[chr1:22349218]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 22349213 22349223 SREBF1 JASPAR yes 27338822
chr1 22349213 22349223 SREBF2 JASPAR yes 27338823
chr1 22349215 22349228 NR2F1 JASPAR yes 27338824
chr1 22349218 22349226 NR4A2 JASPAR yes 27338825
chr1 22349218 22349231 JUN JASPAR yes 27338826
Genes associated with rs553804210[chr1:22349218], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More