EnhancerDB
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  3. rs553845522[chr12:53269588]
Enhancers that have rs553845522[chr12:53269588]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53249369 53285465 enh14733
Bone Marrow (K562) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs553845522[chr12:53269588]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53266838 53269794 ZNF143 GTRD no Epithelial (MCF-7) 21547696
chr12 53266838 53269794 ZNF143 GTRD no Epithelial (MCF-7) 108034458
chr12 53266838 53269794 ZNF143 GTRD no Epithelial (MCF-7) 108034459
chr12 53266945 53270088 ZNF143 GTRD no Epithelial (MCF-7) 21547698
chr12 53266945 53270088 ZNF143 GTRD no Epithelial (MCF-7) 108034461
chr12 53266945 53270088 ZNF143 GTRD no Epithelial (MCF-7) 108034462
chr12 53267138 53270034 ZNF274 GTRD no Blood (GM12878) 108034463
chr12 53267184 53269590 ZNF274 GTRD no Bone Marrow (K562) 21547701
chr12 53267184 53269590 ZNF274 GTRD no Bone Marrow (K562) 108034467
chr12 53267186 53269818 ZNF143 GTRD no Epithelial (MCF-7) 21547702
chr12 53267186 53269818 ZNF143 GTRD no Epithelial (MCF-7) 108034468
chr12 53267323 53269708 ZNF274 GTRD no Cervix (HeLa-S3) 21547709
chr12 53267323 53269708 ZNF274 GTRD no Cervix (HeLa-S3) 108034476
chr12 53267559 53270146 ZNF143 GTRD no Epithelial (MCF-7) 21547749
chr12 53267559 53270146 ZNF143 GTRD no Epithelial (MCF-7) 108034519
chr12 53267713 53269591 ZBTB33 GTRD no Lung (A549) 21547784
chr12 53267713 53269591 ZBTB33 GTRD no Lung (A549) 108034564
chr12 53268065 53270761 ZNF274 GTRD no Bone Marrow (K562) 21547904
chr12 53268065 53270761 ZNF274 GTRD no Bone Marrow (K562) 108034746
chr12 53268065 53270761 ZNF274 GTRD no Bone Marrow (K562) 108034747
chr12 53268065 53270802 ZNF274 GTRD no Bone Marrow (K562) 21547905
chr12 53268065 53270802 ZNF274 GTRD no Bone Marrow (K562) 108034748
chr12 53268065 53270802 ZNF274 GTRD no Bone Marrow (K562) 108034749
chr12 53269039 53269651 ZNF274 GTRD no Bone Marrow (K562) 21547952
chr12 53269089 53269703 ZNF274 GTRD no Bone Marrow (K562) 21547953
chr12 53269363 53270244 ZNF274 GTRD no Bone Marrow (K562) 21547954
chr12 53269520 53269829 ZBTB33 GTRD no Lung (A549) 21547955
chr12 53269547 53269730 ZNF274 GTRD no Bone Marrow (K562) 21547956
chr12 53269580 53269600 RREB1 JASPAR yes 120957901
chr12 53269582 53269602 RREB1 JASPAR yes 120957902
chr12 53269584 53269604 RREB1 JASPAR yes 120957903
chr12 53269586 53269606 RREB1 JASPAR yes 120957904
chr12 53269588 53269608 RREB1 JASPAR yes 120957905
Genes associated with rs553845522[chr12:53269588], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More