EnhancerDB
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  3. rs553868108[chr17:75323820]
Enhancers that have rs553868108[chr17:75323820]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 75303345 75332203 enh4616
Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs553868108[chr17:75323820]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 75323810 75323824 SPI1 JASPAR yes 56067523
chr17 75323810 75323824 SPIC JASPAR yes 56067524
chr17 75323813 75323834 IRF1 JASPAR yes 56067525
chr17 75323819 75323834 FOXP1 JASPAR yes 56067526
Genes associated with rs553868108[chr17:75323820], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More