EnhancerDB
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  3. rs553880198[chr16:21537578]
Enhancers that have rs553880198[chr16:21537578]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 21511505 21540535 enh3934
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Neural Stem Cells (H9) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs553880198[chr16:21537578]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 21537290 21537833 ZNF274 GTRD no Bone Marrow (K562) 21697286
chr16 21537347 21537717 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21697287
chr16 21537369 21537773 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21697288
chr16 21537407 21537797 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21697289
chr16 21537434 21537664 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21697290
chr16 21537444 21537668 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21697291
chr16 21537449 21537693 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21697292
chr16 21537465 21537655 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21697293
chr16 21537476 21537652 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21697294
chr16 21537570 21537591 REST JASPAR yes 9930427
Genes associated with rs553880198[chr16:21537578], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 21413558 21459888 - NPIPB3 ENSG00000169246.12 21459888 77690 Spleen 0.40781 14627