EnhancerDB
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  3. rs553884476[chr17:25793309]
Enhancers that have rs553884476[chr17:25793309]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25791425 25838215 enh17063
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs553884476[chr17:25793309]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25793275 25793875 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108245447
chr17 25793304 25793316 ZBTB7B JASPAR yes 53632855
chr17 25793304 25793316 ZBTB7C JASPAR yes 53632856
chr17 25793305 25793317 ZBTB7A JASPAR yes 53632857
Genes associated with rs553884476[chr17:25793309], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More