EnhancerDB
  1. Home
  2. SNP
  3. rs553895962[chr1:211911218]
Enhancers that have rs553895962[chr1:211911218]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 211903585 211916175 enh908
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Thyroid Breast Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Thymus Epithelial (MCF-7)
Transcript factors that have rs553895962[chr1:211911218]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 211909765 211913107 TCF7L2 GTRD no Colon (HCT116) 107867568
chr1 211910202 211913426 ZNF274 GTRD no Cervix (HeLa-S3) 21377326
chr1 211910202 211913426 ZNF274 GTRD no Cervix (HeLa-S3) 107867569
chr1 211910802 211911234 ZNF274 GTRD no Blood (GM12878) 21377335
chr1 211911205 211911218 TFAP2B JASPAR yes 35080731
chr1 211911211 211911225 PLAG1 JASPAR yes 35080732
chr1 211911214 211911226 INSM1 JASPAR yes 35080734
Genes associated with rs553895962[chr1:211911218], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More