EnhancerDB
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  3. rs553900955[chr12:96844280]
Enhancers that have rs553900955[chr12:96844280]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96795782 96855361 enh14922
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs553900955[chr12:96844280]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96844267 96844282 FOXP1 JASPAR yes 123072883
chr12 96844267 96844288 IRF1 JASPAR yes 123072884
chr12 96844269 96844281 FOXC2 JASPAR yes 123072885
chr12 96844271 96844286 STAT2 JASPAR yes 123072886
chr12 96844272 96844284 IRF1 JASPAR yes 123072887
chr12 96844274 96844294 RREB1 JASPAR yes 123072888
chr12 96844280 96844300 RREB1 JASPAR yes 123072889
Genes associated with rs553900955[chr12:96844280], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More