EnhancerDB
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  3. rs553903787[chr2:223904616]
Enhancers that have rs553903787[chr2:223904616]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 223899494 223911408 enh34310
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Lung (PC-9) Astrocyte Bone (Osteoblast) Muscle (A673) Colon (HCT116) Uterus Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9)
Transcript factors that have rs553903787[chr2:223904616]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 223904609 223904620 PHOX2A JASPAR yes 81234345
chr2 223904612 223904622 EMX1 JASPAR yes 81234346
chr2 223904612 223904622 GBX2 JASPAR yes 81234347
chr2 223904612 223904622 GSX1 JASPAR yes 81234348
chr2 223904612 223904622 GSX2 JASPAR yes 81234349
chr2 223904612 223904622 HOXB2 JASPAR yes 81234350
chr2 223904612 223904622 HOXB3 JASPAR yes 81234351
chr2 223904612 223904622 MEOX1 JASPAR yes 81234352
chr2 223904612 223904622 MEOX2 JASPAR yes 81234353
chr2 223904612 223904622 MIXL1 JASPAR yes 81234354
chr2 223904612 223904622 MNX1 JASPAR yes 81234355
chr2 223904612 223904623 HOXA10 JASPAR yes 81234356
chr2 223904613 223904621 LMX1A JASPAR yes 81234357
chr2 223904613 223904621 LMX1B JASPAR yes 81234358
chr2 223904613 223904621 NKX6-1 JASPAR yes 81234359
chr2 223904613 223904621 NKX6-2 JASPAR yes 81234360
chr2 223904613 223904621 PDX1 JASPAR yes 81234361
chr2 223904613 223904621 VAX1 JASPAR yes 81234362
chr2 223904613 223904621 VAX2 JASPAR yes 81234363
chr2 223904613 223904621 VSX1 JASPAR yes 81234364
chr2 223904613 223904623 HOXD13 JASPAR yes 81234365
Genes associated with rs553903787[chr2:223904616], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More