EnhancerDB
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  3. rs553928011[chr1:180492472]
Enhancers that have rs553928011[chr1:180492472]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 180482964 180504974 enh12423
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs553928011[chr1:180492472]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 180492470 180492482 IRF1 JASPAR yes 33520764
chr1 180492470 180492485 IRF9 JASPAR yes 33520765
Genes associated with rs553928011[chr1:180492472], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More