EnhancerDB
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  3. rs553937685[chr16:19152248]
Enhancers that have rs553937685[chr16:19152248]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 19138245 19156894 enh16588
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs553937685[chr16:19152248]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 19152235 19152248 NR2F1 JASPAR yes 9853486
chr16 19152239 19152249 MAX JASPAR yes 9853490
chr16 19152239 19152250 USF1 JASPAR yes 9853491
chr16 19152239 19152250 USF2 JASPAR yes 9853492
chr16 19152240 19152250 TFE3 JASPAR yes 9853493
chr16 19152240 19152250 TFEB JASPAR yes 9853494
Genes associated with rs553937685[chr16:19152248], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More