EnhancerDB
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  3. rs553938978[chr17:73335248]
Enhancers that have rs553938978[chr17:73335248]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 73329469 73350521 enh4601
Bone Marrow (K562) Skin (Keratinocyte) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myotube) Neural Stem Cells (H9) Thymus Kidney
Transcript factors that have rs553938978[chr17:73335248]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 73335234 73335248 IRF7 JASPAR yes 55944987
chr17 73335240 73335250 HOXA13 JASPAR yes 55944989
chr17 73335240 73335250 HOXB13 JASPAR yes 55944990
chr17 73335240 73335250 HOXD13 JASPAR yes 55944991
chr17 73335240 73335251 HOXA10 JASPAR yes 55944992
chr17 73335241 73335250 CDX1 JASPAR yes 55944993
Genes associated with rs553938978[chr17:73335248], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More