EnhancerDB
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  3. rs553939827[chr1:117255253]
Enhancers that have rs553939827[chr1:117255253]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117246825 117269613 enh43034
Skin (Keratinocyte) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Blood (OCI-LY7) Stomach Muscle (A673) Lung (PC-9) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs553939827[chr1:117255253]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117255233 117255254 ZNF263 JASPAR yes 31830800
chr1 117255240 117255260 PPARG JASPAR yes 31830801
chr1 117255247 117255260 NFKB1 JASPAR yes 31830803
chr1 117255247 117255260 NFKB2 JASPAR yes 31830804
chr1 117255248 117255259 NFKB1 JASPAR yes 31830805
chr1 117255252 117255263 E2F6 JASPAR yes 31830806
Genes associated with rs553939827[chr1:117255253], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More